Dear George Kirakosyan,
I followed your essay to your viXra 'wave-vortex' paper and very much appreciate your work in both. I fully agree with "thinkers by own brains" versus "followers of holy instructions", as you will see if you read my essay. Like Lindsay in your 2016 paper, we agree that science is "comprehension of the essence of things by thinking".
I agree with you that our century-old methodology was adopted politically, and is maintained politically, despite inconsistencies and underdetermination issues. I address aspects of this in my essay, in terms of projections on reality which, as you point out, do not similarly confuse economists, businessmen, engineers, 'who also use math in their daily jobs'. Instead (some) physicists "elevate their mathematical apparatus to a mystical level." Yes...'serious intellectual problems'. You remind us that "many indisputable founders of physics...have preferred to go away from "official" science." There is no sensible answer to your question about the Higgs; and you are correct about the electron! Both c,h and inter-transmutation of particles support your thesis that all kinds of particles are formed from the same substance.
So I agree with most of your essay and much of your viXra paper and I enjoyed reading them. I invite you to read my essay.
Best regards,
Edwin Eugene Klingman