Sara - great essay! I thoroughly enjoyed it, and it's an excellent overview of the latest in the field. Of course, I may be a little biased in that I'm always happy to see causal emergence make an appearance!
You can check out my own essay on causal emergence and how it relates to agents: http://fqxi.org/community/forum/topic/2873
I did have a question though. At the end of your essay you give a new analysis, which is important because you say "The point of this essay is to suggest that life is like the right of Fig. 5 rather than the left (and is not merely a coarse-grained macrostate of the left)."
The new analysis concerns ECA rule 150. You say that "Shown on the right, is the state transition diagram where a property like 'top-down' causation is explicitly introduced, and the dynamics are run again with Rule 150. Here macro causal interactions are are introduced by blackboxing the width w = 6 CA into two subsystems."
I'm wondering if you could go into further detail about exactly what it means that "a property like 'top-down' causation is explicitly introduced?"
How exactly did you implement these macro causal interactions? Did you add some extra update rules to represent some outside unknown kind of top-down causation? I ask because, if you did merely black box, there should be less states (as some are black boxed) but there are an identical number of states in each picture of the state-transitions. Black boxing would be leaving some states out of your model of the system, so there should be less on the right image.
Additionally, on the left, there are some states that lead only to themselves. But then on the right this isn't true anymore. I'm amazed black boxing could somehow, by itself, change that, as by definition, black boxing is just leaving states out of the model is just choosing to represent a subset of the state-space.
If you did add in some kind of extra macro-only update rules to represent top-down causation, I'm wondering exactly what that shows? We can obviously take any system, add in some outside source of causation or add in new rules, and that system may operate very differently. But the system operating differently will have some microscale description that has those rules in it... so I'm not sure what is being gained. I was just looking for more detail on that analysis.
Anyways, I greatly enjoyed the essay and how nimbly you present the field - thanks so much for the read!
Erik P Hoel